Winter Seminar 2016: “Science Journalism and Editing: The Aggie Transcript”

The Aggie Transcript is offering its first-ever seminar on science journalism and editing in Winter Quarter 2016! Please see the flyer below for more information.

To read more about the course description, the goals of the seminar, course assignments and grading criteria, please visit the link and click “Seminar Schedule: Winter 2016”

Link: http://fys.ucdavis.edu/student/#frs-schedule

Winter Seminar 2016 Flyer-page-001(1)

What is HIV?

By Connie Chen, Microbiology, ’16

Scope

This article was inspired by a friend who is an International Relations and Economics major. She was interested in the science behind HIV and AIDS because she only knew about the stigma carried with being infected with HIV and that it is an incurable virus. After talking to my friend for a few hours, I realized that many people don’t know too much about HIV besides how it spreads and that there is no current cure. My friend was amazed by how complicated HIV was and hopes that future policies about HIV and AIDS will have more background information rather than going with public opinion about the virus. The overarching goal of the paper is to inform the reader about what HIV and AIDS is, what HIV does to the human body, and what treatments are currently available. I hope that you, the reader, will be able to carry out some form of conversation about HIV and AIDS after reading this article.

Continue reading What is HIV?

Open Submissions Month: Health & Medicine

The Aggie Transcript is starting a new monthly collection of selected topics in science, in addition to our regular submissions.

For the month of November, we are currently accepting submissions in: Health & Medicine until Nov. 23rd, 2015.

Editorial Process:

  • Once the writer submits the paper, the editorial board will begin the reviewing process. An editor will be assigned to the paper and will be in charge of notifying the writer about our comments and suggestions. When the editorial board comes to an agreement that the paper is “ready for publication”, these featured reports will be published on our website along with a short, special description about the author.

Guidelines to submit:

  • Email your document to us at: aggietranscript@gmail.com by the deadline
  • As a featured author of the month, you will get to write a short blurb about yourself to be published alongside your submission entry

The Future of Surgery

By Nicole Strossman, Biochemistry and Molecular Biology, ’17

What do you picture when you think about surgery? Most likely, you imagine a person having their body cut open, and then a surgeon performing what is necessary to fix the problem, whether that be removing a damaged organ or tissue, repairing damages internally, or performing some other procedure. In all of these cases, it is expected that the doctor makes a cut large enough so that he or she can see what is inside of the body and operates. However, a new method of surgery takes a radically different approach. Laparoscopic surgery, also called minimally invasive surgery, Band-Aid surgery, or keyhole surgery, is a relatively new surgical technique that is revolutionizing the surgical field. Traditionally, surgery is performed by making a large incision in order to directly view and operate on the tissues, organs, and other structures of interest inside of the body. In contrast, with laparoscopic surgery, a series of small incisions, typically of .5 cm to 1.5 cm, are made along the abdomen. Continue reading The Future of Surgery

Case Report: Sjogren’s Syndrome

By David Ivanov, Biochemistry and Molecular Biology, 2015

Sjogren’s syndrome, like other autoimmune diseases, can be difficult to diagnose definitively, and often relies on a handful of signs and symptoms that can vary substantially from case to case. The only signs considered markers for Sjogren’s are anti-SSA and anti-SSB antibodies, and while anti-SSB is more specific, elevated levels of anti-SSB are actually less common in patients with Sjogren’s syndrome than anti-SSA, leading to some ambiguity in diagnosis.

A seventeen year old female patient presented with a large, soft, sublingual cyst on the left side of the floor of her mouth. While she reported no pain, the cyst was first spotted about a year earlier, and had been growing steadily. Visible swelling was observed on the left side of her face under her jaw line. Surgery was performed to remove the cyst, and an adjacent salivary gland was removed as well. The otorhinolaryngologist took a tissue sample, and histology confirmed a benign growth. The surgeon ordered a blood panel to evaluate antibody levels that might indicate an autoimmune disease. The patient’s serum was negative for rheumatoid factor, anti-SSB antibodies, and anti-nuclear antibodies. However, she was positive for anti-SSA antibodies, with a level of 50 U/ml. Bacterial cultures were negative for oral infection, and an X-ray was negative for sarcoidosis. Patient was discharged after surgery with no medications indicated, as she was not experiencing any other symptoms.

Continue reading Case Report: Sjogren’s Syndrome

Data Reproducibility: The Chink in Science’s Armor

By Christopher Fiscus, Biotechnology, 2015

Science is an additive discipline in which each novel contribution builds upon the breadth of existing scientific knowledge and acts as a launch pad from which to pursue further study.  The scientific community is currently in the midst of a crisis: many studies are not reproducible, meaning that results cannot be adequately verified by other scientists.  According to estimates, approximately 75-90% of preclinical studies published in high-impact journals, such as Science and Nature, cannot be replicated (Begley and Ioannidis 2015).  This lack of reproducibility undermines science as a vehicle for human progress as it means that new research avenues are being pursued based on presumptive hypotheses and unverifiable findings.  The result is a widespread waste of resources, a loss of public trust in the scientific establishment, and a reduced applicability of science as a tool to better the quality of human life.  Potential solutions to this crisis include improving researcher training, employing more rigorous peer review, and increasing the transparency of scientific literature.      Continue reading Data Reproducibility: The Chink in Science’s Armor

What is LASIK?

By David Ivanov, Biochemistry and Molecular Biology, 2015

LASIK, or laser-assisted in situ keratomileusis, is a surgical procedure commonly used to correct for visual defects or lack of visual clarity. Commonly referred to as laser eye surgery, LASIK is a type of surgery that is used to alleviate visual loss associated with common defects of the eye, such as myopia (nearsightedness), hypermetropia (farsightedness), and astigmatism. Astigmatism, like near and far-sightedness, can be caused by the irregularity in shape of the cornea that leads to blurred vision. For all three cases, corneal remodeling via LASIK can be performed (Thomson, 2015).

The cornea is the outermost layer of the eye, the transparent part that one can touch, and upon which contact lenses are placed. It is responsible for most of the focusing power, and thus is a common culprit in visual defects of the eye. The cornea focuses the light reflected into the eye, through the lens and onto the the retina at the back of the eye, which senses light and converts it to nerve impulses, and transmits the resulting image to the brain for processing. This then produces the image that we ‘see’. While the retina is the part of the eye that is light-sensitive and is responsible for transmitting the image to the brain, the cornea, along with the lens, must focus light reflecting off of three dimensional surfaces so that they strike onto the anterior, or front part of the retina. Without this precise focusing of light rays directly onto the retina, the brain generates a blurred image (NKCF 2014).

Continue reading What is LASIK?

A Work In Progress

By Shadeh Ghaffari-Rafi, Neurobiology, Physiology, & Behavior, ’16

At first, Jerry’s expected springtime pollen allergies didn’t bother him or seem unusual. His allergies caused mild nosebleeds, which he would stop by pinching his nose for five minutes. This past year, however, the bleeding didn’t stop.

Five years ago, Jerry relocated to Iowa for work, as the company he worked for in California closed. For the past five years, everyday, Jerry has been taking two pills, one to alleviate his heart rate, blood pressure, and heart strain and another to lower his blood cholesterol. His doctor recommended that Jerry occasionally take low dose aspirin so his blood would flow more easily, he would feel less chest pain, and avoid blood clots and severe headaches. Although he hiked and went to the gym regularly, for a 5’5’’ 56 year old man, he was slightly overweight at 165 lbs.

A nosebleed, or epistaxis, can range from mild to severe, and sometimes lead to life-threatening consequences, depending on the flow (Fried 2013). The bleeding is due to rupture of small blood vessels inside the nose. Professor of head and neck surgery at Albert Einstein College of Medicine, Dr. Marvin Fried describes minor bleedings tend to occur “more frequently in children and adolescents” and most are easily treatable, while more severe, rarer cases occur in patients over 50, with blood oozing down the back of the throat, and generally require emergency treatment. Epistaxis may result from mild conditions, including nose picking, mild allergies to pollen or environmental irritants, and moderate conditions such as trauma or prior nasal surgery. In some cases, epistaxis can occur due to life threatening conditions such as leukemia. Family history of severe or heavy bleeding tends toward more severe cases and patients at risk of cardiovascular disease tend to have severe nosebleeds. Dr. Fried emphasizes “epistaxis can be either short-term and disappear quickly or it can also occur in sudden episodes”. In some instances, epistaxis occurs with other symptoms, such as fever, headache, and dizziness. Continue reading A Work In Progress

Can Polio Cure Cancer?

By Briga Mullin, Biochemistry and Molecular Biology, ’15

The human body’s immune system has been developed to successfully battle foreign invaders including bacteria, parasites, and viruses. Immunotherapy is the idea that the power of the immune system can be utilized against diseases such as cancer. Typically, the immune system does not harm the body’s own cells, preventing it from being extremely effective against cancer. However with different medical interventions to strengthen the body’s immune response, it is possible to get an effective treatment (Cancer Immunotherapy 2015).

A unique and exciting branch of immunotherapy involves oncolytic viruses, genetically modified viruses that are used to infect tumor cells and fight cancer (Vile, Ando, and Kirn 2002). One example of an oncolytic virus is Oncolytic Polio/Rhinovirus Recombinant (PVS-RIPO), a genetic combination of poliovirus and a strain of the common cold. Continue reading Can Polio Cure Cancer?

Bhutan Rice Fields

elizabethridolfibhutan1

By Elizabeth Ridolfi

This is a photograph of the rice fields in Bhutan, where I did a 6- week field research program through the School for Field Studies in Summer 2014. Bhutan is a small, Himalayan country located near India and Nepal.The spread of rice cultivation in Bhutan is an illustration the effect of global climate change. Rice typically grows in low lying, relatively warm areas with high precipitation certain times of the year. The vast majority of the country’s land area is above 6000 feet, which is considered too high of an elevation for rice cultivation under normal circumstances. Continue reading Bhutan Rice Fields

An undergraduate life sciences journal at UC Davis